Serialized Form

Package nz.ac.waikato.bibliography.algorithm

Class nz.ac.waikato.bibliography.algorithm.OutputBibliographyXML extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.bibliography.algorithm.OutputBridgesByCluster extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.bibliography.algorithm.OutputDifference extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Package nz.ac.waikato.mcennis.rat.graph

Class nz.ac.waikato.mcennis.rat.graph.Clique extends ModelShell implements Serializable

Serialized Fields

parent

Graph parent

relation

java.lang.String relation

actorType

java.lang.String actorType

name

java.lang.String name

intersection

java.util.HashSet<E> intersection

map

java.util.HashMap<K,V> map

actors

java.util.TreeSet<E> actors

property

java.util.HashMap<K,V> property

Class nz.ac.waikato.mcennis.rat.graph.DerbyGraph extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

userList

UserIDList userList

actorClass

java.lang.String actorClass

addActorStatement

java.sql.PreparedStatement addActorStatement

addActorGraphStatement

java.sql.PreparedStatement addActorGraphStatement

addActorPropertyStatement

java.sql.PreparedStatement addActorPropertyStatement

addLinkStatement

java.sql.PreparedStatement addLinkStatement

addLinkPropertyStatement

java.sql.PreparedStatement addLinkPropertyStatement

addLinkGraphStatement

java.sql.PreparedStatement addLinkGraphStatement

addGraphStatement

java.sql.PreparedStatement addGraphStatement

addGraphPropertyStatement

java.sql.PreparedStatement addGraphPropertyStatement

addGraphChildStatement

java.sql.PreparedStatement addGraphChildStatement

addPathSetStatement

java.sql.PreparedStatement addPathSetStatement

addPathStatement

java.sql.PreparedStatement addPathStatement

addPathSetPathStatement

java.sql.PreparedStatement addPathSetPathStatement

addPathActorStatement

java.sql.PreparedStatement addPathActorStatement

graphGetIDStatement

java.sql.PreparedStatement graphGetIDStatement

getActorStatement

java.sql.PreparedStatement getActorStatement

getActorByTypeStatement

java.sql.PreparedStatement getActorByTypeStatement

getActorByIDStatement

java.sql.PreparedStatement getActorByIDStatement

getActorByIDTypeStatement

java.sql.PreparedStatement getActorByIDTypeStatement

getActorIteratorStatement

java.sql.PreparedStatement getActorIteratorStatement

getActorCountStatement

java.sql.PreparedStatement getActorCountStatement

getActorPropertiesStatement

java.sql.PreparedStatement getActorPropertiesStatement

getActorTypesStatement

java.sql.PreparedStatement getActorTypesStatement

actorGetIDStatement

java.sql.PreparedStatement actorGetIDStatement

getActorByIndexStatement

java.sql.PreparedStatement getActorByIndexStatement

getLinkStatement

java.sql.PreparedStatement getLinkStatement

getLinkByTypeStatement

java.sql.PreparedStatement getLinkByTypeStatement

getLinkBySourceStatement

java.sql.PreparedStatement getLinkBySourceStatement

getLinkByDestStatement

java.sql.PreparedStatement getLinkByDestStatement

getLinkByBothStatement

java.sql.PreparedStatement getLinkByBothStatement

getLinkByActorStatement

java.sql.PreparedStatement getLinkByActorStatement

getLinkTypesStatement

java.sql.PreparedStatement getLinkTypesStatement

getLinkByAllStatement

java.sql.PreparedStatement getLinkByAllStatement

getLinkPropertiesStatement

java.sql.PreparedStatement getLinkPropertiesStatement

getGraphID

java.sql.PreparedStatement getGraphID

getGraphName

java.sql.PreparedStatement getGraphName

getGraphChildrenStatement

java.sql.PreparedStatement getGraphChildrenStatement

getGraphParentStatement

java.sql.PreparedStatement getGraphParentStatement

getGraphByLinkGraphStatement

java.sql.PreparedStatement getGraphByLinkGraphStatement

getGraphByActorGraphStatement

java.sql.PreparedStatement getGraphByActorGraphStatement

getGraphPropertiesStatement

java.sql.PreparedStatement getGraphPropertiesStatement

getGraphPropertiesByTypeStatement

java.sql.PreparedStatement getGraphPropertiesByTypeStatement

getPathSetStatement

java.sql.PreparedStatement getPathSetStatement

getPathSetByNameStatement

java.sql.PreparedStatement getPathSetByNameStatement

getPathSetIDStatement

java.sql.PreparedStatement getPathSetIDStatement

getPathIDStatement

java.sql.PreparedStatement getPathIDStatement

getPathByPathSetStatement

java.sql.PreparedStatement getPathByPathSetStatement

getPathActorStatement

java.sql.PreparedStatement getPathActorStatement

deleteActorStatement

java.sql.PreparedStatement deleteActorStatement

deleteActorGraphStatement

java.sql.PreparedStatement deleteActorGraphStatement

deleteActorPropertiesStatement

java.sql.PreparedStatement deleteActorPropertiesStatement

deleteLinkStatement

java.sql.PreparedStatement deleteLinkStatement

deleteLinkByActorStatement

java.sql.PreparedStatement deleteLinkByActorStatement

deleteLinkGraphStatement

java.sql.PreparedStatement deleteLinkGraphStatement

deleteLinkPropertiesStatement

java.sql.PreparedStatement deleteLinkPropertiesStatement

anonymize

java.sql.PreparedStatement anonymize

updateGraphProperty

java.sql.PreparedStatement updateGraphProperty

directory

java.io.File directory

database

java.lang.String database

graphID

int graphID

parameter

ParameterInternal[] parameter

Class nz.ac.waikato.mcennis.rat.graph.MemGraph extends ModelShell implements Serializable

serialVersionUID: 3L

Serialized Fields

actor

java.util.HashMap<K,V> actor

Map of actor ids to user objects by type of actor

links

java.util.HashMap<K,V> links

three level object. First level is a hashmap of userlinks based on type. Second level hashmap is of source user ids. The third level is a vector of all userlinks that map to the same type and source user. It is assumed that types will enforce their own restrictions on the type of each actor in the link.

invertedLinks

java.util.HashMap<K,V> invertedLinks

properties

java.util.HashMap<K,V> properties

pathSets

java.util.HashMap<K,V> pathSets

parent

Graph parent

children

java.util.LinkedList<E> children

name

java.lang.String name

mapped

UserIDList mapped

outs

java.io.Writer outs

gzip

boolean gzip

parameter

ParameterInternal[] parameter

Class nz.ac.waikato.mcennis.rat.graph.NullGraph extends ModelShell implements Serializable

serialVersionUID: 1L

Class nz.ac.waikato.mcennis.rat.graph.PostgresqlGraph extends DerbyGraph implements Serializable

Serialized Fields

user

java.lang.String user

Class nz.ac.waikato.mcennis.rat.graph.Tree extends MemGraph implements Serializable

Serialized Fields

roots

java.util.LinkedList<E> roots

Class nz.ac.waikato.mcennis.rat.graph.UserIDList extends ModelShell implements Serializable

Serialized Fields

usernames

java.util.HashSet<E> usernames

Class nz.ac.waikato.mcennis.rat.graph.UserList extends ModelShell implements Serializable

serialVersionUID: 1L

Serialized Fields

userType

java.lang.String[] userType

actor

java.util.Vector<E> actor

name

java.lang.String name

Package nz.ac.waikato.mcennis.rat.graph.actor

Class nz.ac.waikato.mcennis.rat.graph.actor.BasicUser extends ModelShell implements Serializable

serialVersionUID: 1L

Serialized Fields

type

java.lang.String type

ID

java.lang.String ID

properties

java.util.HashMap<K,V> properties

pages

java.util.HashMap<K,V> pages

Class nz.ac.waikato.mcennis.rat.graph.actor.DBActor extends ModelShell implements Serializable

Serialized Fields

id

int id

nameSet

boolean nameSet

typeSet

boolean typeSet

name

java.lang.String name

type

java.lang.String type

Package nz.ac.waikato.mcennis.rat.graph.algorithm

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddBasicGeodesicPaths extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

usedCount

java.util.HashSet<E> usedCount

map

java.util.HashMap<K,V> map

nodeExpansion

java.util.HashMap<K,V> nodeExpansion

userList

Actor[] userList

pathSet

PathSet pathSet

lastPath

PathSet lastPath

nextPath

PathSet nextPath

seedNodes

java.util.HashSet<E> seedNodes

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddBasicInterestLink extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

leftCount

double leftCount

rightCount

double rightCount

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddDegreeGraphProperties extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddGeodesicProperties extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddMusicLinks extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

leftCount

double leftCount

variable holding the weight for the source to destination link

rightCount

double rightCount

variable holding weight for the destination to the source music link

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddMusicRecommendations extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.AddMusicReferences extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

decider

ArtistDecider decider

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

artistDeciderProps

java.util.Properties artistDeciderProps

Class nz.ac.waikato.mcennis.rat.graph.algorithm.Difference extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.ExtractMusicCoverage extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptor[] output

input

InputDescriptor[] input

Class nz.ac.waikato.mcennis.rat.graph.algorithm.IdentifyBridges extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.OptimizedPathBase extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

actorToID

java.util.Hashtable<K,V> actorToID

path

PathNode[] path

Class nz.ac.waikato.mcennis.rat.graph.algorithm.PrincipalComponentsAnalysis extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.RankingProperties extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.TrimEdgeUsers extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.AggregateByGraph extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.AggregateByLinkProperty extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.AggregateLinks extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.AggregateOnActor extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.CombineProperty extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.FromGraphToActor extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.aggregators.PropertyToLink extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.clustering

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.BicomponentClusterer extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

dfs_num

java.util.Map<K,V> dfs_num

high

java.util.Map<K,V> high

parents

java.util.Map<K,V> parents

stack

java.util.Stack<E> stack

converse_depth

int converse_depth

graphCount

int graphCount

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.EnumerateMaximalCliques extends ModelShell implements Serializable

Serialized Fields

maximal

java.util.HashSet<E> maximal

set of candidate maximal cliques including the seed node

globalMaximal

java.util.HashSet<E> globalMaximal

set of all maximal cliques confirmed to date

currentLevel

java.util.HashSet<E> currentLevel

All current cliques generated by breadth first search of new maximal clique candidates from a given seed node for a given clique size

lastLevel

java.util.HashSet<E> lastLevel

all potential maximal clique candidates generated in the previous step all cliques in this set are of the same size.

cliqueCount

int cliqueCount

Generates a unique clique name based on the order that the clique is discovered.

parameter

ParameterInternal[] parameter

Description of all parameters that modify how this algorithm interacts with other algorithms. Used to automate parameter setting

input

InputDescriptorInternal[] input

Formal description of all algorithmic inputs used by this algorithm. This algorithm requires a link type as input. (Type is specified in paramters)

output

OutputDescriptorInternal[] output

Formal description of all algorithmic outputs. This algorithm generates one property on actors of a given relation. (Specified in parameter settings)

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.FindStronglyConnectedComponents extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

core

FindStronglyConnectedComponentsCore core

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.FindWeaklyConnectedComponents extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

graphCount

int graphCount

component

java.util.HashSet<E> component

seen

java.util.HashSet<E> seen

children

java.util.LinkedList<E> children

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.NaiveImplementClique extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.NormanGirvanEdgeBetweenessClustering extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

graph

Graph graph

core

OptimizedLinkBetweenessCore core

graphProperties

java.util.Properties graphProperties

stronglyConnected

FindStronglyConnectedComponentsCore stronglyConnected

count

int count

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.TraditionalEdgeBetweenessClustering extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

graph

Graph graph

orderedBetweeness

Duples<L,R>[] orderedBetweeness

core

OptimizedLinkBetweenessCore core

graphProperties

java.util.Properties graphProperties

stronglyConnected

FindStronglyConnectedComponentsCore stronglyConnected

top

int top

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.WekaClassifierClusterer extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.clustering.WekaProbablisticClusterer extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.collaborativefiltering

Class nz.ac.waikato.mcennis.rat.graph.algorithm.collaborativefiltering.AssociativeMining extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.collaborativefiltering.Item2Item extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.collaborativefiltering.User2User extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

user2Index

java.util.HashMap<K,V> user2Index

artist2Index

java.util.HashMap<K,V> artist2Index

artist2Link

java.util.HashMap<K,V> artist2Link

artist

Actor[] artist

Package nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.HalfLife extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.KendallTau extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.MeanErrorEvaluation extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

maxRecommendation

double maxRecommendation

minRecommendation

double minRecommendation

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.PearsonCorrelation extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.PrecisionRecallFMeasure extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.RecommendationError extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.evaluation.ROCAreaEvaluation extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.machinelearning

Class nz.ac.waikato.mcennis.rat.graph.algorithm.machinelearning.MultiInstanceSVM extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptor[] output

input

InputDescriptor[] input

user

Actor[] user

artists

Actor[] artists

Class nz.ac.waikato.mcennis.rat.graph.algorithm.machinelearning.SVM extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptor[] output

input

InputDescriptor[] input

user

Actor[] user

artists

Actor[] artists

Class nz.ac.waikato.mcennis.rat.graph.algorithm.machinelearning.WekaClassifierMultiAttribute extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptor[] output

input

InputDescriptor[] input

Class nz.ac.waikato.mcennis.rat.graph.algorithm.machinelearning.WekaClassifierOneAttribute extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptor[] output

input

InputDescriptor[] input

Package nz.ac.waikato.mcennis.rat.graph.algorithm.prestige

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddBasicBetweenessCentrality extends ModelShell implements Serializable

serialVersionUID: 1L

Serialized Fields

userList

Actor[] userList

betweeness

double[] betweeness

maxBetweeness

double maxBetweeness

map

java.util.HashMap<K,V> map

parameter

ParameterInternal[] parameter

output

OutputDescriptorInternal[] output

input

InputDescriptorInternal[] input

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddBetweenessCentrality extends AddBasicBetweenessCentrality implements Serializable

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddClosenessCentrality extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

maxCentrality

double maxCentrality

maxPrestige

double maxPrestige

centralityValue

double[] centralityValue

prestigeValue

double[] prestigeValue

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddCombinedCloseness extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

usedCount

java.util.HashSet<E> usedCount

map

java.util.HashMap<K,V> map

nodeExpansion

java.util.HashMap<K,V> nodeExpansion

userList

Actor[] userList

lastPath

PathSet lastPath

nextPath

PathSet nextPath

seedNodes

java.util.HashSet<E> seedNodes

prestigeValue

double[] prestigeValue

centralityValue

double[] centralityValue

maxPrestige

double maxPrestige

maxCentrality

double maxCentrality

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddDegreeCentrality extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

parameter

ParameterInternal[] parameter

output

OutputDescriptorInternal[] output

input

InputDescriptorInternal[] input

prestigeMaxDegree

double prestigeMaxDegree

centralityValue

double[] centralityValue

prestigeValue

double[] prestigeValue

centralityMaxDegree

double centralityMaxDegree

actorCount

int actorCount

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.AddPageRankPrestige extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.HITSPrestige extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.OptimizedBetweeness extends OptimizedPathBase implements Serializable

Serialized Fields

betweeness

double[] betweeness

maxBetweeness

double maxBetweeness

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.OptimizedCloseness extends OptimizedPathBase implements Serializable

Serialized Fields

prestigeValue

double[] prestigeValue

centralityValue

double[] centralityValue

maxPrestige

double maxPrestige

maxCentrality

double maxCentrality

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.OptimizedLinkBetweeness extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

maxBetweeness

double maxBetweeness

core

OptimizedLinkBetweenessCore core

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.ScalableHitsPrestige extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.prestige.ScalablePageRankPrestige extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.similarity

Class nz.ac.waikato.mcennis.rat.graph.algorithm.similarity.GraphSimilarityByProperty extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.similarity.HierarchyByCooccurance extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.similarity.SimilarityByLink extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.similarity.SimilarityByProperty extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.transformToArray

Class nz.ac.waikato.mcennis.rat.graph.algorithm.transformToArray.ActorDistanceMatrix extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

base

ActorDistanceMatrixCore base

Class nz.ac.waikato.mcennis.rat.graph.algorithm.transformToArray.DirectedTriplesHistogram extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.transformToArray.UndirectedTriplesHistogram extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptorInternal[] input

output

OutputDescriptorInternal[] output

Package nz.ac.waikato.mcennis.rat.graph.algorithm.visual

Class nz.ac.waikato.mcennis.rat.graph.algorithm.visual.BasicDisplayGraph extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.visual.ColoredByPropertyGraph extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Class nz.ac.waikato.mcennis.rat.graph.algorithm.visual.DisplayAll extends ModelShell implements Serializable

Serialized Fields

parameter

ParameterInternal[] parameter

input

InputDescriptor[] input

output

OutputDescriptor[] output

Package nz.ac.waikato.mcennis.rat.graph.link

Class nz.ac.waikato.mcennis.rat.graph.link.BasicUserLink extends ModelShell implements Serializable

serialVersionUID: 1L

Serialized Fields

strength

double strength

source

Actor source

destination

Actor destination

type

java.lang.String type

directional

boolean directional

properties

java.util.LinkedList<E> properties

Class nz.ac.waikato.mcennis.rat.graph.link.DBLink extends ModelShell implements Serializable

Serialized Fields

id

int id

start

Actor start

strength

double strength

finish

Actor finish

type

java.lang.String type

Package nz.ac.waikato.mcennis.rat.graph.page

Class nz.ac.waikato.mcennis.rat.graph.page.BasicCartesianPage extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

histogram

java.util.HashMap<K,V> histogram

ID

java.lang.String ID

Package nz.ac.waikato.mcennis.rat.graph.path

Class nz.ac.waikato.mcennis.rat.graph.path.NotConstructedError extends java.lang.Error implements Serializable

serialVersionUID: 1L

Serialized Fields

message

java.lang.String message

Package nz.ac.waikato.mcennis.rat.graph.property

Class nz.ac.waikato.mcennis.rat.graph.property.BasicProperty extends ModelShell implements Serializable

serialVersionUID: 2L

Serialized Fields

values

java.util.Vector<E> values

objectType

java.lang.Class<T> objectType

type

java.lang.String type

Class nz.ac.waikato.mcennis.rat.graph.property.InvalidObjectTypeException extends java.lang.Exception implements Serializable

Serialized Fields

message

java.lang.String message

Package nz.ac.waikato.mcennis.rat.graphdisplay

Class nz.ac.waikato.mcennis.rat.graphdisplay.ActorPanel extends javax.swing.JScrollPane implements Serializable

Serialized Fields

innerPanel

javax.swing.JPanel innerPanel

visualizationButton

javax.swing.JButton visualizationButton

toggleAnimation

javax.swing.JButton toggleAnimation

bigEntries

java.util.HashMap<K,V> bigEntries

Class nz.ac.waikato.mcennis.rat.graphdisplay.DisplayLargeStringPropertyFrame extends javax.swing.JFrame implements Serializable

Serialized Fields

property

Property property

Class nz.ac.waikato.mcennis.rat.graphdisplay.LinkPanel extends javax.swing.JScrollPane implements Serializable

Serialized Fields

innerPanel

javax.swing.JPanel innerPanel

visualizationButton

javax.swing.JButton visualizationButton

toggleAnimation

javax.swing.JButton toggleAnimation

bigEntries

java.util.HashMap<K,V> bigEntries

Class nz.ac.waikato.mcennis.rat.graphdisplay.MainWindow extends javax.swing.JFrame implements Serializable

Serialized Fields

graph

MemGraph graph

user

java.lang.String user

jButton1

javax.swing.JButton jButton1

jButton2

javax.swing.JButton jButton2

jComboBox1

javax.swing.JComboBox jComboBox1

jComboBox2

javax.swing.JComboBox jComboBox2

jLabel1

javax.swing.JLabel jLabel1

jPanel1

javax.swing.JPanel jPanel1

jScrollPane1

javax.swing.JScrollPane jScrollPane1

jScrollPane2

javax.swing.JScrollPane jScrollPane2

jSplitPane1

javax.swing.JSplitPane jSplitPane1

jTextField1

javax.swing.JTextField jTextField1

jTextPane1

javax.swing.JTextPane jTextPane1

jTree1

javax.swing.JTree jTree1

Class nz.ac.waikato.mcennis.rat.graphdisplay.PrefuseGraphView extends javax.swing.JPanel implements Serializable

Serialized Fields

m_vis

prefuse.Visualization m_vis

running

boolean running

Class nz.ac.waikato.mcennis.rat.graphdisplay.PrefuseGraphView.GraphMenuAction extends javax.swing.AbstractAction implements Serializable

Serialized Fields

m_view

PrefuseGraphView m_view

Class nz.ac.waikato.mcennis.rat.graphdisplay.PrefuseGraphView.OpenGraphAction extends javax.swing.AbstractAction implements Serializable

Serialized Fields

m_view

PrefuseGraphView m_view

Class nz.ac.waikato.mcennis.rat.graphdisplay.VisualizationPanel extends javax.swing.JFrame implements Serializable

Serialized Fields

running

boolean running

m_vis

prefuse.Visualization m_vis

g

prefuse.data.Graph g

split

javax.swing.JSplitPane split

actorPanel

ActorPanel actorPanel

linkPanel

LinkPanel linkPanel

animate

prefuse.action.ActionList animate

Package nz.ac.waikato.mcennis.rat.gui

Class nz.ac.waikato.mcennis.rat.gui.ApplicationTableModel extends javax.swing.table.DefaultTableModel implements Serializable

Serialized Fields

dataSource

java.util.Vector<E> dataSource

algorithms

java.util.Vector<E> algorithms

algorithmsPatterns

java.util.Vector<E> algorithmsPatterns

Class nz.ac.waikato.mcennis.rat.gui.EditComponent extends javax.swing.JFrame implements Serializable

Serialized Fields

component

Component component

model

PropertiesTableModel model

source

ApplicationTableModel source

row

int row

graphPatternField

javax.swing.JTextField graphPatternField

pattern

java.lang.String pattern

Class nz.ac.waikato.mcennis.rat.gui.PropertiesCellRenderer extends javax.swing.table.DefaultTableCellRenderer implements Serializable

Class nz.ac.waikato.mcennis.rat.gui.PropertiesTableModel extends javax.swing.table.DefaultTableModel implements Serializable

Serialized Fields

parameters

Parameter[] parameters

Class nz.ac.waikato.mcennis.rat.gui.RatGui extends javax.swing.JFrame implements Serializable

Serialized Fields

appModel

ApplicationTableModel appModel

graphPropertiesModel

PropertiesTableModel graphPropertiesModel

schedulerPropertiesModel

PropertiesTableModel schedulerPropertiesModel

base

Graph base

scheduler

Scheduler scheduler

running

boolean running

componentEditor

EditComponent componentEditor

updater

SwingUpdater updater

dataThread

RatExecutionThread dataThread

AlgorithmExecLabel

javax.swing.JLabel AlgorithmExecLabel

AlgorithmListLabel

javax.swing.JLabel AlgorithmListLabel

ApplicationLabel

javax.swing.JLabel ApplicationLabel

CopyMenu

javax.swing.JMenuItem CopyMenu

CutAction

javax.swing.JMenuItem CutAction

EditMenu

javax.swing.JMenu EditMenu

FileMenu

javax.swing.JMenu FileMenu

LoadMenu

javax.swing.JMenuItem LoadMenu

LoggingLevel

javax.swing.JComboBox LoggingLevel

PasteMenu

javax.swing.JMenuItem PasteMenu

QuitMenu

javax.swing.JMenuItem QuitMenu

SaveMenu

javax.swing.JMenuItem SaveMenu

SystemOutput

javax.swing.JTextArea SystemOutput

SystemOutputLabel

javax.swing.JLabel SystemOutputLabel

addButton

javax.swing.JButton addButton

algorithmExecList

javax.swing.JPanel algorithmExecList

algorithmLabel

javax.swing.JLabel algorithmLabel

algorithmProgressBar

javax.swing.JProgressBar algorithmProgressBar

createButtonPanel

javax.swing.JPanel createButtonPanel

createExecutionPipelinePanel

javax.swing.JPanel createExecutionPipelinePanel

createExecutionPipelineScrollPane

javax.swing.JScrollPane createExecutionPipelineScrollPane

createExecutionPipelineTable

javax.swing.JTable createExecutionPipelineTable

createTab

javax.swing.JPanel createTab

deleteButton

javax.swing.JButton deleteButton

editButton

javax.swing.JButton editButton

executeButtonPanel

javax.swing.JPanel executeButtonPanel

executeTab

javax.swing.JPanel executeTab

executionAlgorithmScrollPane

javax.swing.JScrollPane executionAlgorithmScrollPane

executionAlgorithmTable

javax.swing.JTable executionAlgorithmTable

executionCancel

javax.swing.JButton executionCancel

executionOutputScrollPane

javax.swing.JScrollPane executionOutputScrollPane

executionStart

javax.swing.JButton executionStart

givenAlgorithmsPanel

javax.swing.JPanel givenAlgorithmsPanel

givenAlgorithmsScrollPane

javax.swing.JScrollPane givenAlgorithmsScrollPane

givenAlgorithmsTree

javax.swing.JTree givenAlgorithmsTree

graphClassLabel

javax.swing.JLabel graphClassLabel

graphComboBox

javax.swing.JComboBox graphComboBox

graphLabel

javax.swing.JLabel graphLabel

graphPanel

javax.swing.JPanel graphPanel

graphProgressBar

javax.swing.JProgressBar graphProgressBar

graphScrollPane

javax.swing.JScrollPane graphScrollPane

graphTab

javax.swing.JPanel graphTab

graphTable

javax.swing.JTable graphTable

graphTableLabel

javax.swing.JLabel graphTableLabel

jMenuBar1

javax.swing.JMenuBar jMenuBar1

jTabbedPane1

javax.swing.JTabbedPane jTabbedPane1

moveDownButton

javax.swing.JButton moveDownButton

moveUpButton

javax.swing.JButton moveUpButton

schedulerClassLabel

javax.swing.JLabel schedulerClassLabel

schedulerComboBox

javax.swing.JComboBox schedulerComboBox

schedulerPanel

javax.swing.JPanel schedulerPanel

schedulerScrollPane

javax.swing.JScrollPane schedulerScrollPane

schedulerTable

javax.swing.JTable schedulerTable

schedulerTableLabel

javax.swing.JLabel schedulerTableLabel

systemOutputPanel

javax.swing.JPanel systemOutputPanel

Class nz.ac.waikato.mcennis.rat.gui.SizeIncreaseCellRenderer extends javax.swing.table.DefaultTableCellRenderer implements Serializable